AlignmentViewer: Sequence Analysis of Large Protein Families [article]

Roc Reguant, Yevgeniy Antipin, Rob Sheridan, Augustin Luna, Chris Sander
2018 bioRxiv   pre-print
AlignmentViewer is multiple sequence alignment viewer for protein families with flexible visualization, analysis tools and links to protein family databases. It is directly accessible in web browsers without the need for software installation, as it is implemented in JavaScript, and does not require an internet connection to function. It can handle protein families with tens of thousands of sequences and is particularly suitable for evolutionary coupling analysis, facilitating the computation
more » ... protein 3D structures and the detection of functionally constrained interactions.
doi:10.1101/269720 fatcat:a5ncpgp4ynbwrlyfdf7klb7psi