Characterization of a phage-like pyocin from the plant growth-promoting rhizobacterium Pseudomonas fluorescens SF4c

S. Fischer, A. Godino, J. M. Quesada, P. Cordero, E. Jofre, G. Mori, M. Espinosa-Urgel
2012 Microbiology  
R-type and F-type pyocins are high-molecular-mass bacteriocins produced by Pseudomonas aeruginosa that resemble bacteriophage tails. They contain no head structures and no DNA, and are used as defence systems. In this report, we show that Pseudomonas fluorescens SF4c, a strain isolated from the wheat rhizosphere, produces a high-molecular-mass bacteriocin which inhibits the growth of closely related bacteria. A mutant deficient in production of this antimicrobial compound was obtained by
more » ... son mutagenesis. Sequence analysis revealed that the transposon had disrupted a gene that we have named ptm, since it is homologous to that encoding phage tape-measure protein in P. fluorescens Pf0-1, a gene belonging to a prophage similar to phage-like pyocin from P. aeruginosa PAO1. In addition, we have identified genes from the SF4c pyocin cluster that encode a lytic system and regulatory genes. We constructed a nonpolar ptm mutant of P. fluorescens SF4c. Heterologous complementation of this mutation restored the production of bacteriocin. Real-time PCR was used to analyse the expression of pyocin under different stress conditions. Bacteriocin was upregulated by mitomycin C, UV light and hydrogen peroxide, and was downregulated by saline stress. This report constitutes, to our knowledge, the first genetic characterization of a phage tail-like bacteriocin in a rhizosphere Pseudomonas strain. In the case of plant-associated pseudomonads, bacteriocin research has been focused on plant-pathogenic strains of Abbreviation: AU, arbitrary units. The GenBank/EMBL/DDBJ accession numbers for the sequences reported in this paper are JN857965, JQ036169 and JQ036170. A supplementary figure, showing the alignment of the predicted amino acid sequence of the ptm gene product from P. fluorescens SF4c with the PTM protein from P. fluorescens Pf0-1, is available with the online version of this paper. Microbiology
doi:10.1099/mic.0.056002-0 pmid:22442306 fatcat:7qrcebz6ebd3vltyjpr2supwea