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Consistent Re-Modeling of Signaling Pathways and Its Implementation in the TRANSPATH Database
2004
Genome Informatics Series
The data model of the signaling pathways database TRANSPATH has been re-engineered to a three-layer model comprising experimental evidences and summarized pathway information, both in a mechanistically detailed manner, and a "semantic" projection for the abstract overview. Each molecule is described in the context of a certain reaction in the multidimensional space of posttranslational modification, molecular family relationships, and the biological species of its origin. The new model makes
doi:10.11234/gi1990.15.2_244
fatcat:urw3dchqtfe7nogvwwiwh2vtzm