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PDBe: Protein Data Bank in Europe

S. Velankar, Y. Alhroub, C. Best, S. Caboche, M. J. Conroy, J. M. Dana, M. A. Fernandez Montecelo, G. van Ginkel, A. Golovin, S. P. Gore, A. Gutmanas, P. Haslam (+20 others)
2011 Nucleic Acids Research  

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The Protein Data Bank in Europe (PDBe; pdbe.org) is a partner in the Worldwide PDB organization (wwPDB; wwpdb.org) and as such actively involved in managing the single global archive of biomacromolecular structure data, the PDB. In addition, PDBe develops tools, services and resources to make structure-related data more accessible to the biomedical community. Here we describe recently developed, extended or improved services, including an animated structure-presentation widget (PDBportfolio), a
more » ... widget to graphically display the coverage of any UniProt sequence in the PDB (UniPDB), chemistry-and taxonomy-based PDB-archive browsers (PDBeXplore), and a tool for interactive visualization of NMR structures, corresponding experimental data as well as validation and analysis results (Vivaldi).
doi:10.1093/nar/gkr998 pmid:22110033 pmcid:PMC3245096 fatcat:q5b4mmkggbepdebpme7koi7hye
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Citation

S. Velankar, Y. Alhroub, C. Best, S. Caboche, M. J. Conroy, J. M. Dana, M. A. Fernandez Montecelo, G. van Ginkel, A. Golovin, S. P. Gore, A. Gutmanas, P. Haslam, P. M. S. Hendrickx, E. Heuson, M. Hirshberg, M. John, I. Lagerstedt, S. Mir, L. E. Newman, T. J. Oldfield, A. Patwardhan, L. Rinaldi, G. Sahni, E. Sanz-Garcia, S. Sen, R. Slowley, A. Suarez-Uruena, G. J. Swaminathan, M. F. Symmons, W. F. Vranken, M. Wainwright, G. J. Kleywegt. "PDBe: Protein Data Bank in Europe." Nucleic Acids Research 40.D1 (2011) D445-D452