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Acceleration of the SPADE Method Using a Custom-Tailored FP-Growth Implementation
2021
The SPADE (spatio-temporal Spike PAttern Detection and Evaluation) method was developed to find reoccurring spatio-temporal patterns in neuronal spike activity (parallel spike trains). However, depending on the number of spike trains and the length of recording, this method can exhibit long runtimes. Based on a realistic benchmark data set, we identified that the combination of pattern mining (using the FP-Growth algorithm) and the result filtering account for 85-90% of the method's total
doi:10.18154/rwth-2021-09579
fatcat:ombb2nhrrndctbmliqq2p6dfya