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EFFECTIVE OPTIMIZATION ALGORITHMS FOR FRAGMENT-ASSEMBLY BASED PROTEIN STRUCTURE PREDICTION
Computational Systems Bioinformatics
Despite recent developments in protein structure prediction, an accurate new fold prediction algorithm remains elusive. One of the challenges facing current techniques is the size and complexity of the space containing possible structures for a query sequence. Traditionally, to explore this space fragment assembly approaches to new fold prediction have used stochastic optimization techniques. Here we examine deterministic algorithms for optimizing scoring functions in protein structuredoi:10.1142/9781860947575_0010 fatcat:ipe4mlrfvfejldxkrnbbzgejqa