Background: Purine rich element binding protein A (Pur-alpha),encoded by the PURA gene, is an important transcriptional regulator that binds to DNA and RNA and is involved in processes such as DNA replication and RNA translation. Pur-alpha plays an important role in the nervous system. Our previous research found that the regulatory effect of Pur-alpha on APP suggests that it may be involved in the production of beta-amyloids. Suggestting that Pur-alpha may plays a role in Alzheimer 's disease

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... AD), but the relevant evidence is insufficient.Methods: We performed RNA-sequencing (RNA-seq) analysis of Pura-KO mouse hippocampal neuronal cell line (HT22) to analyze the effect of puralpha deletion on neuron expression profile. And then combined with ChIP-seq analysis to explore the mechanism of Pura on gene regulation.Results: we found 656 differentially expressed genes between HT22 and Pura-KO HT22. A total of 62 overlapping genes were found by comparison with early brain protein expression profiles in mice, which may play important role in early neuronal development. We found 7 Alzheimer's disease (AD)-related genes (Lpl, Mapt, Mme, Ndufa3, Lrp1, Gapdh, mt-Co3) and 5 Ab clearance related genes (Mme, C3, Lrp1, Insr, Trem2) were regulated by Pur-alpha, suggesting that Pur-alpha plays an important role in AD. Through ChIP-seq analysis, we found that Pur-alpha binds directly to 47 genes and regulates their transcription, including Insr, Mapt, Vldlr, Jag1, etc. The direct regulation of Vldlr,the Reelin ligand,suggests that Pur-alpha may be involved in the process of synaptic plasticity. The direct regulation of Jag1 suggests that Pur-alpha may be involved in the Notch pathway.Conclusions: Our study re-confirms the important role of Pur-alpha in neurodevelopment. The regulation of Pur-alpha on AD-related genes means that Pur-alpha plays an important role in the pathogenesis of AD.