Cytochrome c heme lyase can mature a fusion peptide composed of the amino-terminal residues of horse cytochrome c

Wesley B. Asher, Kara L. Bren
2012 Chemical Communications  
Electronic Supplementary Information Synthesis of the PSD95-PDZ3 domain gene The gene coding for residues 309-401 corresponding to the third PDZ domain (PDZ3) of the Rattus norvegicus post synaptic density 95 protein (PSD-95) 1-2 flanked between AgeI and KpnI restriction sites ( Figure S1 ) was synthesized and inserted into a pMK cloning vector by GeneArt. The PDZ3 gene was designed to include an ochre stop codon before the KpnI site for expression purposes. The PDZ3 gene was removed from the
more » ... K vector using an NdeI site upstream from the PDZ3 gene and the KpnI site and inserted into a pET17b plasmid (Novagen), yielding pETPDZ3. A second AgeI site within the structural gene of PDZ3 ( Figure S1 ) was removed from pETPDZ3 by making a G322G silent mutation (ACCGGT to ACCGGC) using the G322G-primers (Table S2) and Quick-Change site-directed mutagenesis methods (Stratagene). The resulting vector, pETPDZ3-1, contained the PDZ3 structural gene flanked between unique AgeI and KpnI sites. Figure S1 . 5'-3' DNA sequence of the Rattus norvegicus PSD95-PDZ3 gene synthesized and contained in a pMK-cloning vector. Each codon of the gene contains the coding amino acid above, and the amino acid numbering (309-401) of PDZ3 in PSD95 is listed to the right. The restriction sites used or modified for this study are shown. Construction of expression vectors. The pBTR(hCc) 3 plasmid ( Figure S2A ) coding for horse heart cytochrome c (cyt c) and yeast heme lyase (CCHL) ( Figure S2B ) was a gift from Prof. Gary J. Pielak (University of North Carolina Chapel Hill). A lac promoter upstream of the gene cluster controls the expression of both cyt c and CCHL, and a gene coding β-lactamase for ampicillin resistance (Amp r ) is used for bacterial colony selection. Electronic Supplementary Material (ESI) for Chemical Communications This journal is
doi:10.1039/c2cc31112g pmid:22792539 fatcat:skc2e6m2nff7viamve42vnjzsq