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STOCHSIM: modelling of stochastic biomolecular processes
2001
Bioinformatics
Preserved Fulltext
STOCHSIM is a stochastic simulator for chemical reactions. Molecules are represented as individual software objects that react according to probabilities derived from concentrations and rate constants. Version 1.2 of STOCHSIM provides a novel cross-platform graphical interface written in Perl/Tk. A simple two-dimensional spatial structure has also been implemented, in which nearest-neighbour interactions of molecules in a 2-D lattice can be simulated.
doi:10.1093/bioinformatics/17.6.575
pmid:11395441
fatcat:geinrqp7hzgjpctb5yjibd3ejm