MOESM6 of The recombination-cold region as an epidemiological marker of recombinogenic opportunistic pathogen Mycobacterium avium

Hirokazu Yano, Haruo Suzuki, Fumito Maruyama, Tomotada Iwamoto
2019 Figshare  
Additional file 6. Insertions near the recombination-cold region. (A) Similarity between two chromosomes. Locations of the recombination-cold region and the MCE operon locus 3 are indicated by white horizontal lines. The similarity between two genomes was determined by the blastn algorithm implemented in GenomeMatcher software [60]. Genomic positions are shown by strain names. (B) Insertions in the tRNA gene cluster. Green pentagons indicate the tRNA gene. Yellow pentagons or circles indicate
more » ... circles indicate integrase (a tyrosine recombinase, int) or excisionase (xis). The insert in strain H87 contain 31 copies of recombinase genes. (C) Conservation of marker genes in the MAH recombination-cold region in M. chimaera, M. intracellulare, M. marinum, and M. kansasii. (D) Absence of marker genes in M. abscessus, M. ulcerans, M. tuberculosis, M. canettii, and M. smegmatis. (PDF 7032 kb)
doi:10.6084/m9.figshare.10000856.v1 fatcat:idh3xrsymnhqbm2v2mlfbo2yim