The information science of microbial ecology

Aria S Hahn, Kishori M Konwar, Stilianos Louca, Niels W Hanson, Steven J Hallam
2016 Current Opinion in Microbiology  
A revolution is unfolding in microbial ecology where petabytes of 'multi-omics' data are produced using next generation sequencing and mass spectrometry platforms. This cornucopia of biological information has enormous potential to reveal the hidden metabolic powers of microbial communities in natural and engineered ecosystems. However, to realize this potential, the development of new technologies and interpretative frameworks grounded in ecological design principles are needed to overcome
more » ... utational and analytical bottlenecks. Here we explore the relationship between microbial ecology and information science in the era of cloud-based computation. We consider microorganisms as individual information processing units implementing a distributed metabolic algorithm and describe developments in ecoinformatics and ubiquitous computing with the potential to eliminate bottlenecks and empower knowledge creation and translation.
doi:10.1016/j.mib.2016.04.014 pmid:27183115 fatcat:bhlgmvfmk5gsflhb6dzkg7jg2i