The Internet Archive has a preservation copy of this work in our general collections.
The file type is application/pdf
.
The Biological Reference Repository (BioR): a rapid and flexible system for genomics annotation
2014
Computer applications in the biosciences : CABIOS
Motivation: The Biological Reference Repository (BioR) is a toolkit for annotating variants. BioR stores public and user-specific annotation sources in indexed JSON-encoded flat files (catalogs). The BioR toolkit provides the functionality to combine and retrieve annotation from these catalogs via the command-line interface. Several catalogs from commonly used annotation sources and instructions for creating user-specific catalogs are provided. Commands from the toolkit can be combined with
doi:10.1093/bioinformatics/btu137
pmid:24618464
pmcid:PMC4071205
fatcat:x6dcfudyynfa5pqqnj4ba3sle4