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PANADA: Protein Association Network Annotation, Determination and Analysis
2013
PLoS ONE
Increasingly large numbers of proteins require methods for functional annotation. This is typically based on pairwise inference from the homology of either protein sequence or structure. Recently, similarity networks have been presented to leverage both the ability to visualize relationships between proteins and assess the transferability of functional inference. Here we present PANADA, a novel toolkit for the visualization and analysis of protein similarity networks in Cytoscape. Networks can
doi:10.1371/journal.pone.0078383
pmid:24265686
pmcid:PMC3827049
fatcat:32qvawdtjngp5onz5of7rgn3ee