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Nannochloropsis salina is a halotolerant, high-lipid-producing microalga that is being explored as a biofuel production species. Here, we report an improved high-quality draft assembly and annotation for the nuclear genome of N. salina strain CCMP1776.doi:10.1128/mra.00750-19 pmid:31672738 pmcid:PMC6953503 fatcat:uhpwyuashfdhfie7ht52i4h5aa