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A software program combining sequence motif searches with keywords for finding repeats containing DNA sequences
2004
Bioinformatics
Motivation: One of the most interesting features of genomes (both coding and non-coding regions) is the presence of relatively short tandemly repeated DNA sequences known as tandem repeats (TRs). We developed a new PC-based standalone software analysis program, combining sequence motif searches with keywords such as organs, tissues, cell lines or development stages for finding exact, inexact and compound, TRs. Tandem Repeats Analyzer 1.5 (TRA) has several advanced repeat search
doi:10.1093/bioinformatics/bth410
pmid:15256410
fatcat:y4izljyqtzhv7evovpbhqitjsy