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RSAT peak-motifs: fast extraction of transcription factor binding motifs from full-size ChIP-seq datasets
2012
EMBnet journal
ChIP-seq has become a method of choice to study binding preferences of transcription factors, and localization of epigenetic regulatory marks at a genomic scale. There is a crucial need for specialized software tools to make sense of these data. While various programs have been developed to perform read mapping and peak calling, the subsequent steps have not yet reached proper maturation: identifying relevant transcription factor binding motifs and the precise location of their binding sites
doi:10.14806/ej.17.b.266
fatcat:s5cadt7h6jco7pmq4w26r3xok4