A Survey of State of the Art Biomedical Text Mining Techniques for Semantic Analysis

Hong-Jie Dai, Chi-Hsin Huang, Jaimie Yi-Wen Lin, Pei-Hsuan Chou, Richard Tzong-Han Tsai, Wen-Lian Hsu
2008 2008 IEEE International Conference on Sensor Networks, Ubiquitous, and Trustworthy Computing (sutc 2008)  
In recent years, a range of text-mining applications have been developed to improve access to knowledge for biologists and database curators. This paper surveys text-mining works published from 2006 to 2008, with the emphasis on named entity recognition, biological relation extraction and currently available online biological text mining services. ABNER [46] Protein/Gene/DNA/RNA/cell tagger http://pages.cs.wisc.edu/~bsettles/abner/ AIIAGMT [22] Gene and protein name tagger
more » ... AIIAGMT/index.html AliasServer [23] Protein alias handler http://cbi.labri.fr/outils/alias/index.php BANNER [33] Gene and protein name tagger http://banner.sourceforge.net/ BioCaster [13] Health protection roles tagger http://biocaster.nii.ac.jp/ BCMS Gene and protein name tagger http://bcms.bioinfo.cnio.es GAPSCORE [6] Protein name tagger
doi:10.1109/sutc.2008.86 dblp:conf/sutc/DaiHLCTH08 fatcat:rro4q63izfesvo7q3mfzhxelwu