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SuperTranscript: a data driven reference for analysis and visualisation of transcriptomes
[article]
2016
bioRxiv
pre-print
Numerous methods have been developed to analyse RNA sequencing data, but most rely on the availability of a reference genome, making them unsuitable for non-model organisms. De novo transcriptome assembly can build a reference transcriptome from the non-model sequencing data, but falls short of allowing most tools to be applied. Here we present superTranscripts, a simple but powerful solution to bridge that gap. SuperTranscripts are a substitute for a reference genome, consisting of all the
doi:10.1101/077750
fatcat:vftrycmdczfr3ghy653vf6edzy