RNA-Seq Data Analysis in Galaxy

Bérénice Batut, Marius van den Beek, Maria A Doyle, Nicola Soranzo
2021 Msphere  
A complete RNA-Seq analysis involves the use of several different tools, with substantial software and computational requirements. The Galaxy platform simplifies the execution of such bioinformatics analyses by embedding the needed tools in its web interface, while also providing reproducibility. Here, we describe how to perform a reference-based RNA-Seq analysis using Galaxy, from data upload to visualization and functional enrichment analysis of differentially expressed genes.
doi:10.1007/978-1-0716-1307-8_20 pmid:33835453 fatcat:7rgme3uzyfgx3eqiio5r3x5ope