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Hydrophobicity of small alkane molecules (propane dimer) in solvents: a classical molecular dynamics study
2020
Bibechana
Molecular Dynamics (MD) simulations of propane dimer in different solvents (water, acetonitrile and methanol) were performed by using CHARMM platform for modeling the solute and solvents. A series of Umbrella sampling MD simulations were carried out in each solvent separately and potential of mean force (PMFs) were calculated by using Weighted Histogram Analysis Method. Results show that two minima (contact minima and solvent separated minima) characterize the PMF of propane dimer in all three
doi:10.3126/bibechana.v17i0.25504
fatcat:qwmvywshhrfwhbmzvthnnd5jy4