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BiG-MAP: an automated pipeline to profile metabolic gene cluster abundance and expression in microbiomes
[article]
2020
bioRxiv
pre-print
Microbial gene clusters encoding the biosynthesis of primary and secondary metabolites play key roles in shaping microbial ecosystems and driving microbiome-associated phenotypes. Although effective approaches exist to evaluate the metabolic potential of such bacteria through identification of metabolic gene clusters in their genomes, no automated pipelines exist to profile the abundance and expression levels of such gene clusters in microbiome samples to generate hypotheses about their
doi:10.1101/2020.12.14.422671
fatcat:n3itfwxsxfe4hb76yjomigrlra