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Revisiting the Voronoi description of protein-protein interfaces
2006
Protein Science
We developed a model of macromolecular interfaces based on the Voronoi diagram and the related alpha-complex, and we tested its properties on a set of 96 protein-protein complexes taken from the Protein Data Bank. The Voronoi model provides a natural definition of the interfaces, and it yields values of the number of interface atoms and of the interface area that have excellent correlation coefficients with those of the classical model based on solvent accessibility. Nevertheless, some atoms
doi:10.1110/ps.062245906
pmid:16943442
pmcid:PMC2242599
fatcat:dsadnchnrrf7dn3la6s7fo3pnm