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Speedup bioinformatics applications on multicore-based processor using vectorizing and multithreading strategies
2007
Bioinformation
Many computational intensive bioinformatics software, such as multiple sequence alignment, population structure analysis, etc., written in C/C++ are not multicore-aware. A multicore processor is an emerging CPU technology that combines two or more independent processors into a single package. The Single Instruction Multiple Data-stream (SIMD) paradigm is heavily utilized in this class of processors. Nevertheless, most popular compilers including Microsoft Visual C/C++ 6.0, x86 gnu C-compiler
doi:10.6026/97320630002182
pmid:18305826
pmcid:PMC2241925
fatcat:pe5fx4ltzvhepcoqopzr7yvv3a