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Comparative Detection of Processed Small RNAs in Archaea
2014
International Work-Conference on Bioinformatics and Biomedical Engineering
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Enzymatic splicing in Archaeal tRNAs is guided by bulgehelix-bulge structural elements, while much less seems to be known about splicing in other small RNAs (sRNAs). We conduct a genome-wide analysis of several archaeal genomes to identify putative BHB elements and compare our findings with available RNA-seq data. We also provide an analysis of the viability of using pattern-based and stochastic structural scanning algorithms for in silico studies of the occurrence of BHB motifs. Furthermore,
dblp:conf/iwbbio/SiederdissenBAW14
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