A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2017; you can also visit the original URL.
The file type is
The advancement of sequencing technologies has made it feasible for researchers to consider many highthroughput biological applications. A core step of these applications is to align an enormous amount of short reads to a reference genome. For example, to resequence a human genome, billions of reads of 35 bp are produced in 1-2 weeks, putting a lot of pressure of faster software for alignment. Based on existing indexing and pattern matching technologies, several short read alignment softwaredoi:10.1109/bibm.2009.42 dblp:conf/bibm/LamLTWWY09 fatcat:prausjgobffh5hv54o6ux5xgdu