Automatic Detection of Defective Zebrafish Embryos via Shape Analysis

Haifeng Zhao, Jun Zhou, Antonio Robles-Kelly, Jianfeng Lu, Jing-Yu Yang
2009 2009 Digital Image Computing: Techniques and Applications  
In this paper, we present a graph-based approach to automatically detect defective zebrafish embryos. Here, the zebrafish is segmented from the background using a texture descriptor and morphological operations. In this way, we can represent the embryo shape as a graph, for which we propose a vectorisation method to recover clique histogram vectors for classification. The clique histogram represents the distribution of one vertex with respect to its adjacent vertices. This treatment permits the
more » ... use of a codebook approach to represent the graph in terms of a set of codewords that can be used for purposes of support vector machine classification. The experimental results show that the method is not only effective but also robust to occlusions and shape variations.
doi:10.1109/dicta.2009.76 dblp:conf/dicta/ZhaoZRLY09 fatcat:pg5qgvy5o5fozbtrpllzv735we