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recount3: summaries and queries for large-scale RNA-seq expression and splicing
[article]
2021
bioRxiv
pre-print
We present recount3, a resource consisting of over 750,000 publicly available human and mouse RNA sequencing (RNA-seq) samples uniformly processed by our new Monorail analysis pipeline. To facilitate access to the data, we provide the recount3 and snapcount R/Bioconductor packages as well as complementary web resources. Using these tools, data can be downloaded as study-level summaries or queried for specific exon-exon junctions, genes, samples, or other features. Monorail can be used to
doi:10.1101/2021.05.21.445138
fatcat:hee4epm6f5dpfmygt5u7yyfwca