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Multiple sequence alignment is a crucial task in a number of biological analyses like secondary structure prediction, domain searching, phylogeny, etc. MSAProbs is currently the most accurate alignment algorithm, but its effectiveness is obtained at the expense of computational time. In the paper we present QuickProbs, the variant of MSAProbs customised for graphics processors. We selected the two most time consuming stages of MSAProbs to be redesigned for GPU execution: the posterior matricesdoi:10.1371/journal.pone.0088901 pmid:24586435 pmcid:PMC3934876 fatcat:wfhb4nqdsre43aegdai2lka5t4