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ProteinFishing: A protein complex generator within the ModelX toolsuite
2020
Bioinformatics
Summary Accurate three-dimensional modelling of protein–protein interactions (PPI) is essential to compensate for the absence of experimentally-determined complex structures. Here, we present a new set of commands within the ModelX toolsuite capable of generating atomic-level protein complexes suitable for interface design. Among these commands, the new tool ProteinFishing proposes known and/or putative alternative 3D PPI for a given protein complex. The algorithm exploits backbone
doi:10.1093/bioinformatics/btaa533
pmid:32437555
pmcid:PMC7390992
fatcat:xv4p2dyhwnethb5ko3cwtr4oue