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Citation: Rees J, Cranston K (2017) Automated assembly of a reference taxonomy for phylogenetic data synthesis. Biodiversity Data Journal 5: e12581. https://doi. Abstract Taxonomy and nomenclature data are critical for any project that synthesizes biodiversity data, as most biodiversity data sets use taxonomic names to identify taxa. Open Tree of Life is one such project, synthesizing sets of published phylogenetic trees into comprehensive summary trees. No single published taxonomy met thedoi:10.3897/bdj.5.e12581 pmid:28765728 pmcid:PMC5515096 fatcat:5tj4fg2gg5bjldmgkyg5zmxqcu