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Researchers working in the field of global connectivity analysis using diffusion magnetic resonance imaging (MRI) can count on a wide selection of software packages for processing their data, with methods ranging from the reconstruction of the local intra-voxel axonal structure to the estimation of the trajectories of the underlying fibre tracts. However, each package is generally task-specific and uses its own conventions and file formats. In this article we present the Connectome Mapper, adoi:10.1371/journal.pone.0048121 pmid:23272041 pmcid:PMC3525592 fatcat:naavh6nttrcorackmqsttvxihe