Regulatory Sequence Analysis Tools

J. van Helden
2003 Nucleic Acids Research  
The web resource Regulatory Sequence Analysis Tools (RSAT) (http://rsat.ulb.ac.be/rsat) offers a collection of software tools dedicated to the prediction of regulatory sites in non-coding DNA sequences. These tools include sequence retrieval, pattern discovery, pattern matching, genome-scale pattern matching, feature-map drawing, random sequence generation and other utilities. Alternative formats are supported for the representation of regulatory motifs (strings or position-specific scoring
more » ... ices) and several algorithms are proposed for pattern discovery. RSAT currently holds >100 fully sequenced genomes and these data are regularly updated from GenBank.
doi:10.1093/nar/gkg567 pmid:12824373 pmcid:PMC168973 fatcat:664jsrokcbcffkirtsydp6u46m