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Mismatch sampling
2012
Information and Computation
We reconsider the well-known problem of pattern matching under the Hamming distance. Previous approaches have shown how to count the number of mismatches efficiently, especially when a bound is known for the maximum Hamming distance. Our interest is different in that we wish to collect a random sample of mismatches of fixed size at each position in the text. Given a pattern p of length m and a text t of length n, we show how to sample with high probability up to c mismatches from every
doi:10.1016/j.ic.2012.02.007
fatcat:avdp5yoo55anjnt22kklxrjswu