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The SUPERFAMILY database in 2004: additions and improvements
2004
Nucleic Acids Research
The SUPERFAMILY database provides structural assignments to protein sequences and a framework for analysis of the results. At the core of the database is a library of pro®le Hidden Markov Models that represent all proteins of known structure. The library is based on the SCOP classi®cation of proteins: each model corresponds to a SCOP domain and aims to represent an entire superfamily. We have applied the library to predicted proteins from all completely sequenced genomes (currently 154), the
doi:10.1093/nar/gkh117
pmid:14681402
pmcid:PMC308851
fatcat:ja7yohpxorgrbdq7nhm4xcf4qq