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Molecular dynamics simulations based on empirical force fields are commonly used in studies of large and complex biological systems. A new set of force field parameters complementing the CHARMM27 all atom empirical force field for nucleic acid was developed for 2-aminopurine and purine, two nucleobase analogues extensively used to probe the nucleic acids structure and dynamics.doi:10.12921/cmst.2003.09.01.127-135 fatcat:2qebu67b6bc3bjwfmnemcfy6jq