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Coupling Accelerated Molecular Dynamics Methods with Thermodynamic Integration Simulations
2008
Journal of Chemical Theory and Computation
In this work we propose a straightforward and efficient approach to improve accuracy and convergence of free energy simulations in condensed-phase systems. We also introduce a new accelerated Molecular Dynamics (MD) approach in which molecular conformational transitions are accelerated by lowering the energy barriers while the potential surfaces near the minima are left unchanged. All free energy calculations were performed on the propane-topropane model system. The accuracy of free energy
doi:10.1021/ct800160q
pmid:19461868
pmcid:PMC2646661
fatcat:3zt7gz4rwjgdbpttsls4ygsbdu