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NLIMED: Natural Language Interface for Model Entity Discovery in Biosimulation Model Repositories
2022
Frontiers in Physiology
Semantic annotation is a crucial step to assure reusability and reproducibility of biosimulation models in biology and physiology. For this purpose, the COmputational Modeling in BIology NEtwork (COMBINE) community recommends the use of the Resource Description Framework (RDF). This grounding in RDF provides the flexibility to enable searching for entities within models (e.g., variables, equations, or entire models) by utilizing the RDF query language SPARQL. However, the rigidity and
doi:10.3389/fphys.2022.820683
pmid:35283794
pmcid:PMC8908213
fatcat:tduvlpjyp5bdlbqvcr6glw6kzq