Establishment of the epithelial-specific transcriptome of normal and malignant human breast cells based on MPSS and array expression data

Anita Grigoriadis, Alan Mackay, Jorge S Reis-Filho, Dawn Steele, Christian Iseli, Brian J Stevenson, C Victor Jongeneel, Haukur Valgeirsson, Kerry Fenwick, Marjan Iravani, Maria Leao, Andrew JG Simpson (+5 others)
2006 Breast Cancer Research  
COMP = cartilage oligomeric matrix protein; DTET = differential tumour epithelial transcriptome; ER = estrogen receptor; GO = Gene Ontology; GSEA = gene set enrichment analysis; HTR = human transcriptome database; IL = interleukin; MAPK = mitogen-activated protein kinases; MIAME = minimum information about a microarray experiment; MPSS = massively parallel signature sequencing; POSTN = periostin; PR = progesterone receptor; RT-PCR = reverse transcription PCR; SAGE = serial analysis of gene
more » ... ssion; TMA = tissue microarray; tpm = transcripts per million; VEGF = vascular endothelial growth factor; VEGFR = vascular endothelial growth factor receptor.
doi:10.1186/bcr1604 pmid:17014703 pmcid:PMC1779497 fatcat:7m7fgomytfg4bbxecgj2eno62q