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PhyloMagnet: fast and accurate screening of short-read meta-omics data using gene-centric phylogenetics
2019
Bioinformatics
Metagenomic and metatranscriptomic sequencing have become increasingly popular tools for producing massive amounts of short-read data, often used for the reconstruction of draft genomes or the detection of (active) genes in microbial communities. Unfortunately, sequence assemblies of such datasets generally remain a computationally challenging task. Frequently, researchers are only interested in a specific group of organisms or genes; yet, the assembly of multiple datasets only to identify
doi:10.1093/bioinformatics/btz799
pmid:31647547
pmcid:PMC7703773
fatcat:vxzvwecib5hzdkowlakaraoe4m