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The properties of glycophorin A transmembrane helices in erythrocyte asymmetric membrane: a molecular dynamics study
The Journal of Atomic and Molecular Sciences
We have performed an 80ns molecular dynamics (MD) simulation of human red blood erythrocyte asymmetric membrane model. The NAMD code and CHARMM27 force field were used. We have estimated some features of embedded glycophorin A (GpA) protein and have discussed some important problems concerning the interaction between the protein and surrounding media. It is stated that the lipid environment and protein immediate neighboring lead to the changes in helix-helix association, as well as to thedoi:10.4208/jams.012711.021511a fatcat:lykwicgqcrd3pdazhcgt5yiyya