Extracting Biological Pathway Models From NLP Event Representations

Michael Spranger, Sucheendra Palaniappan, Samik Ghosh
2015 Proceedings of BioNLP 15  
This paper describes an an open-source software system for the automatic conversion of NLP event representations to system biology structured data interchange formats such as SBML and BioPAX. It is part of a larger effort to make results of the NLP community available for system biology pathway modelers.
doi:10.18653/v1/w15-3805 dblp:conf/bionlp/SprangerPG15 fatcat:2qccccwkr5fvlpkxfdj2lomeky