Caldilinea tarbellica sp. nov., a filamentous, thermophilic, anaerobic bacterium isolated from a deep hot aquifer in the Aquitaine Basin

P. Gregoire, M. Bohli, J.-L. Cayol, M. Joseph, S. Guasco, K. Dubourg, J. Cambar, V. Michotey, P. Bonin, M.-L. Fardeau, B. Ollivier
2010 International Journal of Systematic and Evolutionary Microbiology  
Caldilinea tarbellica sp. nov., a filamentous, thermophilic, anaerobic bacterium isolated from a deep hot aquifer in the Aquitaine Basin An anaerobic, thermophilic, filamentous (0.45 ¾ .100 mm) bacterium, designated D1-25-10-4 T , was isolated from a deep hot aquifer in France. Cells were non-motile and Gram-negative. Growth was observed at 43-65 6C (optimum 55 6C), at pH 6.8-7.8 (optimum pH 7.0) and with 0-5 g NaCl l "1 (optimum 0 g NaCl l "1 ). Strain D1-25-10-4 T was a chemo-organotroph and
more » ... ermented ribose, maltose, glucose, galactose, arabinose, fructose, mannose, sucrose, raffinose, xylose, glycerol, fumarate, peptone, starch and xylan. Yeast extract was required for growth. Sulfate, thiosulfate, sulfite, elemental sulfur, nitrate, nitrite and fumarate were not used as terminal electron acceptors. The G+C content of the DNA was 61.9 mol%. The major cellular fatty acids of strain D1-25-10-4 T were C 17 : 0 , C 18 : 0, C 16 : 0 and iso-C 17 : 0 . The closest phylogenetic relative of strain D1-25-10-4 T was Caldilinea aerophila STL-6-O1 T (97.9 % 16S rRNA gene sequence similarity). DNA-DNA relatedness between strain D1-25-10-4 T and Caldilinea aerophila DSM 14535 T was 8.7±1 %. On the basis of phylogenetic, genotypic and phenotypic characteristics, strain D1-25-10-4 T represents a novel species within the genus Caldilinea, class Caldilineae, phylum Chloroflexi, for which the name Caldilinea tarbellica sp. nov. is proposed. The type strain is
doi:10.1099/ijs.0.025676-0 pmid:20584812 fatcat:6y4cqtsd5bhdlpdarnl5xlvwpm