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The large amount of data that are currently produced in the biological sciences can no longer be explored and visualized efficiently with traditional, specialized software. Instead, new capabilities are needed that offer flexibility, rapid application development and deployment as standalone applications or available through the Web. We describe a new software toolkit--the Molecular Biology Toolkit (MBT; http://mbt.sdsc.edu)--that enables fast development of applications for protein analysisdoi:10.1186/1471-2105-6-21 pmid:15694009 pmcid:PMC548701 fatcat:5wfqzye4rbh37o42vx5znkzjgq