A copy of this work was available on the public web and has been preserved in the Wayback Machine. The capture dates from 2015; you can also visit the original URL.
The file type is application/pdf
.
Automatic RNA secondary structure determination with stochastic context-free grammars
1995
Proceedings. International Conference on Intelligent Systems for Molecular Biology
We have developed a method for predicting the common secondary structure of large RNA multiple alignments using only the information in the alignment. It uses a series of progressively more sensitive searches of the data in an iterative manner to discover regions of base pairing; the first pass examines the entire multiple alignment. The searching uses two methods to find base pairings. Mutual information is used to measure covariation between pairs of columns in the multiple alignment and a
pmid:7584430
fatcat:odr27zv2nzhfrk5467ccqfafoy