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Using the OntoGene pipeline for the triage task of BioCreative 2012
2013
Database: The Journal of Biological Databases and Curation
In this article, we describe the architecture of the OntoGene Relation mining pipeline and its application in the triage task of BioCreative 2012. The aim of the task is to support the triage of abstracts relevant to the process of curation of the Comparative Toxicogenomics Database. We use a conventional information retrieval system (Lucene) to provide a baseline ranking, which we then combine with information provided by our relation mining system, in order to achieve an optimized ranking.
doi:10.1093/database/bas053
pmid:23396322
pmcid:PMC3568389
fatcat:cx2giwh3hren7gu47k74s3sulu