Quantitative estimation of pesticide-likeness for agrochemical discovery

Sorin Avram, Simona Funar-Timofei, Ana Borota, Sridhar Rao Chennamaneni, Anil Kumar Manchala, Sorel Muresan
2014 Journal of Cheminformatics  
The design of chemical libraries, an early step in agrochemical discovery programs, is frequently addressed by means of qualitative physicochemical and/or topological rule-based methods. The aim of this study is to develop quantitative estimates of herbicide-(QEH), insecticide-(QEI), fungicide-(QEF), and, finally, pesticide-likeness (QEP). In the assessment of these definitions, we relied on the concept of desirability functions. Results: We found a simple function, shared by the three classes
more » ... f pesticides, parameterized particularly, for six, easy to compute, independent and interpretable, molecular properties: molecular weight, logP, number of hydrogen bond acceptors, number of hydrogen bond donors, number of rotatable bounds and number of aromatic rings. Subsequently, we describe the scoring of each pesticide class by the corresponding quantitative estimate. In a comparative study, we assessed the performance of the scoring functions using extensive datasets of patented pesticides. Conclusions: The hereby-established quantitative assessment has the ability to rank compounds whether they fail well-established pesticide-likeness rules or not, and offer an efficient way to prioritize (class-specific) pesticides. These findings are valuable for the efficient estimation of pesticide-likeness of vast chemical libraries in the field of agrochemical discovery.
doi:10.1186/s13321-014-0042-6 pmid:25264458 pmcid:PMC4173135 fatcat:kvmsp3f4dnbnpbwjs3pbse536q