InterProScan - an integration platform for the signature-recognition methods in InterPro

E. M. Zdobnov, R. Apweiler
2001 Bioinformatics  
InterProScan is a tool that scans given protein sequences against the protein signatures of the InterPro member databases, currently -PROSITE, PRINTS, Pfam, ProDom and SMART. The number of signature databases and their associated scanning tools as well as the further refinement procedures make the problem complex. Inter-ProScan is designed to be a scalable and extensible system with a robust internal architecture. Availability: The Perl-based InterProScan implementation is available from the
more » ... ftp server (ftp://ftp.ebi.ac.uk/pub/ software/unix/iprscan/) and the SRS-based InterProScan is available upon request. We provide the public web interface (http://www.ebi.ac.uk/interpro/scan.html) as well as email submission server (interproscan@ebi.ac.uk).
doi:10.1093/bioinformatics/17.9.847 pmid:11590104 fatcat:d7qfi3q2nvhonbjwmij4j5nxey