Genetic Analysis of Core Sets of Colored Maize and Non-Colored Maize Inbred Lines using SSR Markers

Byeong Wan Kim, Kyu Jin Sa, Ki Jin Park, Jong Yeol Park, Ju Kyong Lee
2015 Korean Journal of Breeding Science  
In this study, genetic diversity, genetic relationship, population structure and association analysis among 12 colored and non-colored maize lines were investigated using 300 simple sequence repeat (SSR) markers. In genetic diversity analysis, a total of 1,331 alleles were identified at all the loci with an average of 4.44 and a range between 2 and 10 alleles per locus. The major allele frequency varied from 0.25 to 0.92 with an average of 0.48. Among 1,331 alleles, 221 alleles were colored
more » ... e specific allele, and 408 alleles were non-colored maize specific allele. While 702 alleles were shared in colored and non-colored maize lines. In addition, colored maize specific alleles were detected in 163 SSR markers. From population structure analysis, the 12 colored and non-colored maize lines were separated with based on the membership probability threshold 0.8, and divided into groups I, II, III and admixed group. The results of this study could serve as useful molecular markers for identification and characterization of colored and non-colored maize lines in the maize breeding studies. This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. 서 언 옥수수(Zea mays L.)는 세계 3대 중요 작물 중 하나이며, 식용뿐만 아니라 사료용, 공업용 및 바이오에너지 등 다양한 용도로 이용되고 있다. 최근 웰빙(well-being)에 대한 관심이 높아지면서, 자연적으로 생성되는 천연성분을 함유한 고품질, 고기능성을 갖는 작물이나 이를 이용한 가공품을 선호하고 있다. 더욱이 검은콩, 흑미, 흑깨 등 웰빙 건강식으로 블랙푸
doi:10.9787/kjbs.2015.47.1.054 fatcat:yq4wyyytmbe57egvggfv4qbsr4