Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms

K. R. Christie
2004 Nucleic Acids Research  
The Saccharomyces Genome Database (SGD; http:// www.yeastgenome.org/), a scienti®c database of the molecular biology and genetics of the yeast Saccharomyces cerevisiae, has recently developed several new resources that allow the comparison and integration of information on a genome-wide scale, enabling the user not only to ®nd detailed information about individual genes, but also to make connections across groups of genes with common features and across different species. The Fungal Alignment
more » ... ewer displays alignments of sequences from multiple fungal genomes, while the Sequence Similarity Query tool displays PSI-BLAST alignments of each S.cerevisiae protein with similar proteins from any species whose sequences are contained in the non-redundant (nr) protein data set at NCBI. The Yeast Biochemical Pathways tool integrates groups of genes by their common roles in metabolism and displays the metabolic pathways in a graphical form. Finally, the Find Chromosomal Features search interface provides a versatile tool for querying multiple types of information in SGD.
doi:10.1093/nar/gkh033 pmid:14681421 pmcid:PMC308767 fatcat:sgjwrwxhc5clhk3avtgtlxl55u