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xQTL workbench: a scalable web environment for multi-level QTL analysis

D. Arends, K. J. van der Velde, P. Prins, K. W. Broman, S. Moller, R. C. Jansen, M. A. Swertz
2012 Bioinformatics  
xQTL workbench is a scalable web platform for the mapping of quantitative trait loci (QTLs) at multiple levels: for example gene expression (eQTL), protein abundance (pQTL), metabolite abundance (mQTL)  ...  Popular QTL mapping methods for model organism and human populations are accessible via the web user interface.  ...  ACKNOWLEDGEMENTS We thank Konrad Zych for Figure 1 . Conflict of Interest: none declared.  ... 
doi:10.1093/bioinformatics/bts049 pmid:22308096 pmcid:PMC3315722 fatcat:43wyuhz6hzaqpb2kuktatyc46i

WormQTL—public archive and analysis web portal for natural variation data in Caenorhabditis spp

L. Basten Snoek, K. Joeri Van der Velde, Danny Arends, Yang Li, Antje Beyer, Mark Elvin, Jasmin Fisher, Alex Hajnal, Michael O. Hengartner, Gino B. Poulin, Miriam Rodriguez, Tobias Schmid (+5 others)
2012 Nucleic Acids Research  
Here, we present WormQTL (http://www.wormqtl. org), an easily accessible database enabling search, comparative analysis and meta-analysis of all data on variation in Caenorhabditis spp.  ...  We also thank Mark Sterken and Rita Volkers for helpful suggestions, Konrad Zych for graphics design and testing and many members of the C. elegans community for their comments and ideas.  ...  ACKNOWLEDGEMENTS We thank Wormbase for being an easy accessible and versatile data source.  ... 
doi:10.1093/nar/gks1124 pmid:23180786 pmcid:PMC3531126 fatcat:m4flp7y6ave7tdkeuhsvymoyc4